Embracing Green Computing in Molecular Phylogenetics
Molecular Biology and Evolution | 39:msac043 (4 pp)
Limitations of Phylogenomic Data Can Drive Inferred Speciation Rate Shifts
Molecular Biology and Evolution | 39:msac038 (11 pp)
Storyboarding for Biology: An Authentic STEAM Experience
The American Biology Teacher | (In press)
Epistasis Storyboarded
The American Biology Teacher | (accepted)
Epistasis Creates Invariant Sites and Modulates the Rate of Molecular Evolution
Molecular Biology and Evolution | 39:msac106 (11 pp)
TopHap: Rapid Inference of Key Phylogenetic Structures from Common Haplotypes in Large Genome Collections with Limited Diversity
Bioinformatics | 38:2719–2726
A Phylogenetic Approach to Study the Evolution of Somatic Mutational Processes in Cancer
Communications Biology | 5:617 (11 pp)
MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells
Frontiers in Genetics | 13:831040 (8 pp)
Dynamic Coupling of Residues within Proteins as a Mechanistic Foundation of Many Enigmatic Pathogenic Missense Variants
PLoS Computational Biology | 18:e1010006 (22 pp)
Waiting for the Truth: Is Reluctance in Accepting an Early Origin Hypothesis for SARS-CoV-2 Delaying Our Understanding of Viral Emergence?
BMJ Global Health | 7:e008386 (8 pp)
Molecular Evidence for SARS-CoV-2 in Samples Collected from Patients with Morbilliform Eruptions since Late Summer 2019 in Lombardy, Northern Italy
Preprints with The Lancet | (https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3883274)
Development of "Biosearch System" for Biobank Management and Storage of Disease Associated Genetic Information
ScienceDirect | 34:101760 (10 pp)
RRF: An R Package for Evolutionary Dates, Rates, and Priors using Relative Rate Framework
Preprint in bioRxiv